Faculty

Institution

Unit

Venue

Ruxandra I Dima

Professor

University of Cincinnati

Affiliations

College of Arts and Sciences

Chemistry

Ruxandra I Dima is currently serving as a Chemistry Professor at University of Cincinnati.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Ruxandra I Dima

University of Cincinnati

Professor

You can click a keyword to filter the displayed items

biophysics structural biology protein science molecular biology protein structure experimental biophysics molecular biophysics materials science protein folding cytoskeleton biochemistry physical chemistry biomechanics mechanical science structural molecular biology bioinformatics theoretical biology nanomechanics computational biophysics rna biology macromolecular machines molecular simulations molecular investigations enzyme inhibition cellular biochemistry protein misfolding sequence analysis cellular enzymology protein aggregation biochemical sciences cellular physiology chemical sciences peptide science peptides biomolecular interactions enzyme catalysis protein chemistry protein refolding structural bioinformatics conformational studies medical biophysics sensor design cell biomechanics phase diagram lattice models helical fragments sustainable chemistry mammalian biology avian biology animal bioscience condensed matter structural composition trace elements solution (chemistry) surface reactivity supramolecular assemblies molecular fragmentation interfacial studies signaling pathways rna processing hardware acceleration protein function bioconjugation enzyme immobilization sensor technology protein biosynthesis urea solutions aqueous guanidinium chloride protein denaturation mechanism ionic solutes kinetic barriers mechanical unfolding denatured states single-molecule experiments unfolding pathways rna structures biomedical informatics rna folding biological data systems biology computational biology molecular informatics biological computation computational chemistry biophysical chemistry

Notable Scholarly Works

Notable Federal Grants

Collaborators

All Things Allostery: Characterizing the Allosteric Control of the Conformational Transition of the Spastin Severing Motor. Biophysical Journal (2024)

Amanda C. MackeCarter St. ClairShehani D. KahawatteMaria S. KellyRuxandra I. Dima

allosteric controlinflammationbiophysicsconformational transitioncell biologyprotein sciencemotor controlphysiology

A Major Disease-Related Point Mutation in Spastin Alters Dramatically the Dynamics and Allostery of the Motor. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Shehani KahawatteAmanda C. MackeCarter St. ClairRuxandra I. Dima

biologymotor skillsmotor systemsneuroscienceneuroanatomymovement disordersphysiologymotor controlmotor disordersmolecular motors

Correction to “Microtubule Severing Enzymes Oligomerization and Allostery: A Tale of Two Domains”. The Journal of Physical Chemistry B (2024)

Amanda C. MackeMaria S. KellyRohith Anand VarikotiSarah MullenDaniel GrovesClare ForbesRuxandra I. Dima

enzymes oligomerizationbiophysicsstructural biologyprotein structurebiochemistryphysical chemistrymolecular biologyenzymesprotein sciencemolecular biophysics

ERRATUM: “the Quaternary Question: Determining Allostery in Spastin Through Dynamics Classification Learning and Bioinformatics” [J. Chem. Phys. 158, 125102 (2023)]. The Journal of Chemical Physics (2024)

Maria S. KellyAmanda C. MackeShehani KahawatteJacob E. StumpAbigail R. MillerRuxandra I. Dima

computational chemistrybioinformaticsbiomolecular structurebiophysicsdetermining allosterytheoretical biologybiochemistrymolecular biologymolecular sciencechemical sciencesdynamics classification learningquaternary questionphysical chemistrytheoretical chemistrymolecular biophysics

Machine Learning Approaches in Label-Free Small Extracellular Vesicles Analysis With Surface-Enhanced Raman Scattering (Sers) for Cancer Diagnostics. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Der VangMaria S. KellyManisha SheokandManju SharmaLeyla EsfandiariRuxandra I. DimaPietro Strobbia

molecular biologybioinformaticssurface-enhanced raman scatteringcancer diagnostics

Optimizing Biophysical Predictor Selection for Katanin Allosteric Transitions via Metadynamics and Machine Learning. Biophysical Journal (2024)

Maria S. KellyRiccardo CapelliShehani KahawatteHesaree WijethungaPaolo CarloniRuxandra I. Dima

structural biologykatanin allosteric transitionsbiophysical predictor selectionbiophysics

Probing Allosteric Network Perturbations in Spastin Due to a Hereditary Spastic Paraplegia Mutation. Biophysical Journal (2024)

Shehani KahawatteAmanda C. MackeRuxandra I. Dima

geneticsallosteric network perturbationsbiophysicsneurosciencemolecular biophysics

Searching for Structure: Characterizing the Protein Conformational Landscape With Clustering-Based Algorithms. Journal of Chemical Information and Modeling (2024)

Amanda C. MackeJacob E. StumpMaria S. KellyJamie RowleyVageesha HerathSarah MullenRuxandra I. Dima

clustering-based algorithmsbiophysicsstructural biologyclusteringprotein structurestructure determinationprotein conformational landscapeprotein science

Structural and Functional Role of Residues Undergoing Hereditary Spastic Paraplegias-Linked Mutations: Insights From a Simulation of the Spiral to Ring Transition in Katanin. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Maria S KellyRiccardo CapelliRuxandra I DimaPaolo Carloni

geneticsbiophysicsstructural biologycomputational biologyprotein structuremolecular modellingmolecular biologyprotein modeling

A Tale of 12 Tails: Katanin Severing Activity Affected by Carboxy-Terminal Tail Sequences. Biomolecules (2023)

evolutionary biologybiologycarboxy-terminal tail sequencescoevolution

1
2
3
4
5
10
10 / page

Ruxandra I Dima

Professor

University of Cincinnati

Affiliations

College of Arts and Sciences

Chemistry

Ruxandra I Dima is currently serving as a Chemistry Professor at University of Cincinnati.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Ruxandra I Dima

University of Cincinnati

Professor

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

All Things Allostery: Characterizing the Allosteric Control of the Conformational Transition of the Spastin Severing Motor. Biophysical Journal (2024)

Amanda C. MackeCarter St. ClairShehani D. KahawatteMaria S. KellyRuxandra I. Dima

allosteric controlinflammationbiophysicsconformational transitioncell biologyprotein sciencemotor controlphysiology

A Major Disease-Related Point Mutation in Spastin Alters Dramatically the Dynamics and Allostery of the Motor. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Shehani KahawatteAmanda C. MackeCarter St. ClairRuxandra I. Dima

biologymotor skillsmotor systemsneuroscienceneuroanatomymovement disordersphysiologymotor controlmotor disordersmolecular motors

Correction to “Microtubule Severing Enzymes Oligomerization and Allostery: A Tale of Two Domains”. The Journal of Physical Chemistry B (2024)

Amanda C. MackeMaria S. KellyRohith Anand VarikotiSarah MullenDaniel GrovesClare ForbesRuxandra I. Dima

enzymes oligomerizationbiophysicsstructural biologyprotein structurebiochemistryphysical chemistrymolecular biologyenzymesprotein sciencemolecular biophysics

Maria S. KellyAmanda C. MackeShehani KahawatteJacob E. StumpAbigail R. MillerRuxandra I. Dima

Machine Learning Approaches in Label-Free Small Extracellular Vesicles Analysis With Surface-Enhanced Raman Scattering (Sers) for Cancer Diagnostics. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Der VangMaria S. KellyManisha SheokandManju SharmaLeyla EsfandiariRuxandra I. DimaPietro Strobbia

molecular biologybioinformaticssurface-enhanced raman scatteringcancer diagnostics

Optimizing Biophysical Predictor Selection for Katanin Allosteric Transitions via Metadynamics and Machine Learning. Biophysical Journal (2024)

Maria S. KellyRiccardo CapelliShehani KahawatteHesaree WijethungaPaolo CarloniRuxandra I. Dima

structural biologykatanin allosteric transitionsbiophysical predictor selectionbiophysics

Probing Allosteric Network Perturbations in Spastin Due to a Hereditary Spastic Paraplegia Mutation. Biophysical Journal (2024)

Shehani KahawatteAmanda C. MackeRuxandra I. Dima

geneticsallosteric network perturbationsbiophysicsneurosciencemolecular biophysics

Searching for Structure: Characterizing the Protein Conformational Landscape With Clustering-Based Algorithms. Journal of Chemical Information and Modeling (2024)

Amanda C. MackeJacob E. StumpMaria S. KellyJamie RowleyVageesha HerathSarah MullenRuxandra I. Dima

clustering-based algorithmsbiophysicsstructural biologyclusteringprotein structurestructure determinationprotein conformational landscapeprotein science

Maria S KellyRiccardo CapelliRuxandra I DimaPaolo Carloni

geneticsbiophysicsstructural biologycomputational biologyprotein structuremolecular modellingmolecular biologyprotein modeling

A Tale of 12 Tails: Katanin Severing Activity Affected by Carboxy-Terminal Tail Sequences. Biomolecules (2023)

evolutionary biologybiologycarboxy-terminal tail sequencescoevolution

1
2
3
4
5
10
10 / page

Similar Faculty Members

James C Gumbart

Institution

Georgia Institute of Technology

protein modeling

biomolecular structure

Ulrich H.E. Hansmann

Institution

University of Oklahoma

protein refolding

biomolecular structure

Juan Vanegas

Institution

Oregon State University

mechanosensitive channels

multi-scale modeling

Steven D. Schwartz

Institution

University of Arizona

molecular informatics

computational biology

Anatoly B. Kolomeisky

Institution

Rice University

theoretical chemistry

theoretical biology

Joan-Emma Shea

Institution

University of California, Santa Barbara

Piotr E. Marszalek

Institution

Duke University

polysaccharide

carbohydrate chemistry

Prem Chapagain

Institution

Florida International University

molecular docking

protein structural dynamics

Ken A. Dill

Institution

Stony Brook University

protein structure

quantum biology

Robert Jernigan

Institution

Iowa State University

structural bioinformatics

protein bioinformatics

Similar Faculty Members

James C Gumbart

Institution

Georgia Institute of Technology

protein modeling

biomolecular structure

Ulrich H.E. Hansmann

Institution

University of Oklahoma

protein refolding

biomolecular structure

Juan Vanegas

Institution

Oregon State University

mechanosensitive channels

multi-scale modeling

Steven D. Schwartz

Institution

University of Arizona

molecular informatics

computational biology

Anatoly B. Kolomeisky

Institution

Rice University

theoretical chemistry

theoretical biology

Joan-Emma Shea

Institution

University of California, Santa Barbara

Piotr E. Marszalek

Institution

Duke University

polysaccharide

carbohydrate chemistry

Prem Chapagain

Institution

Florida International University

molecular docking

protein structural dynamics

Ken A. Dill

Institution

Stony Brook University

protein structure

quantum biology

Robert Jernigan

Institution

Iowa State University

structural bioinformatics

protein bioinformatics