Faculty

Institution

Unit

Venue

Nate James Cira

Assistant Professor

Cornell University

Affiliations

College of Engineering

School of Biomedical Engineering

Nate James Cira is currently serving as a College Of Engineering Assistant Professor at Cornell University.

Honors

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Experiences

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Education

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Nate James Cira

Cornell University

Assistant Professor

You can click a keyword to filter the displayed items

fluid science wetting microfluidics biomedical engineering biological engineering interface science fluid dynamics fluid flow microbiology fluid mechanics tribology lab-on-a-chip interfacial phenomena design analytical microsystems surface tension interaction design human-computer interaction applied microbiology physical prototyping fluid-solid interactions antimicrobial resistance antibiotics user interfaces design research antimicrobial agents infection control gut microbes bio-inspired computation biomedical imaging molecular liquids tangible user interfaces evolutionary microbiology rapid bacterial evolution self-loading microfluidic device image communication intelligent user interfaces graphic interface antimicrobial susceptibility multimodal human computer interface ambient display interaction techniques microbial diversity synthetic ecology educational robotics educational innovation educational design educational games digestive tract host-microbe interactions capillarity phenomenon active matter swarm robotics swarm dynamic biorobotics microscopy methods biomems bioprocess monitoring interactive computing slide dynamic simulation video game video game development vapour-mediated sensing human pathogens mic determination human-biology interaction light projection robust hbi selective dynamics synthetic microbial community selective regimes devices course device engineering integrated life science marangoni spreading marangoni flow laboratory investigation soft matter clinical engineering biomedical analysis biological imaging synthetic biology

Notable Scholarly Works

Notable Federal Grants

Collaborators

Scalable Genotyping of Microbial Colonies. Microbial Genomics (2025)

Arnold ChenNkazi NchindaNate J. Cira

biological engineeringnucleic acid amplificationhigh throughput sequencingmetagenomicsapplied microbiologylibrary preparationmicrobial isolatesdna sequencingscalable multiplexingmolecular diagnosticsmicroorganismsmicrobial consortiummicrobiology

Structure, Motion, and Multiscale Search of Traveling Networks. Nature Communications (2025)

Nate J. CiraMorgan L. PaullShayandev SinhaFabio ZaniniEric Yue MaIngmar H. Riedel-Kruse

network dynamicsnetwork theoryhigh sensitivitysystems biologyglobal networkscomplex systemsnetwork complexitynetwork scienceexponential growthdynamic networkstheoretical biologynetwork analysismultiscale search

Ez-Spots: A Simple and Robust High-Throughput Liquid Handling Platform. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Jon AlboShenghao TanJoee D DenisRebecca Franklin-GuildSamira ShiriKelsi M SandozNate J Cira

liquid handlinginterface sciencebiomedical engineeringbiological engineeringmicrofabricationantimicrobial packagingorganic coatingsmart surfacespots platformcoatingsrobust high-throughput liquidmulti-functional coatingmicrobiologymicrofluidics

High-Throughput, Combinatorial Droplet Generation by Sequential Spraying. Lab on a Chip (2024)

Rena FukudaNate J Cira

antimicrobial agentspharmaceutical technologysequential sprayinglab-on-a-chippharmaceuticsbiotechnologydroplet immobilizationbiomolecular engineeringantibioticscombinatorial droplet generationdispersion sciencebiomoleculesbiotechnology advanceanalytical microsystemsbiological engineeringmicrofluidics

Surface Patterned Omniphobic Tiles (Spots): A Versatile Platform for Scalable Liquid Handling. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Samira ShiriMohsin J QaziShenghao TanJon AlboArnold ChenRena FukudaMika S JainNkazi NchindaMark MenessesGhada AhmedArynn O GallegosMahesh K GangishettyDaniel N CongreveNate J Cira

interface sciencebiomedical engineeringbiological engineeringmicrofabricationsurface engineeringlab-on-a-chipmicroscale systemspots platformfluid sciencebiofabricationmicrobiologyomniphobic tilesmicrofluidics

Ultra-High-Throughput Screening of Antimicrobial Combination Therapies Using a Two-Stage Transparent Machine Learning Model. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Margaret M. ReuterKatherine L. LevJon AlboHarkirat Singh AroraNemo LiuShenghao TanMadeline R. ShayDebmalya SarkarAaron RobidaDavid H. ShermanRudy J. RichardsonNate J. CiraSriram Chandrasekaran

biomedical informaticspharmacologyhigh-throughput screeningcombination therapiessystems biologydrug resistancedrug discoverytarget predictionmachine learning researchescherichia colicomputational biologydrug targetsbioinformatics

Crystallization by Single Diffusion Through Agar Gel. Biophysical Journal (2023)

Mohsin J. QaziNate J. Cira

materials sciencesoft mattercrystal researchsol-gel synthesisdiffusioncrystal growthdispersion sciencecrystal formationcrystallographysingle diffusion

Marangoni Spreading and Contracting Three-Component Droplets on Completely Wetting Surfaces. Proceedings of the National Academy of Sciences (2022)

Dieter A. BaumgartnerSamira ShiriShayandev SinhaStefan KarpitschkaNate J. Cira

biophysicsinterface sciencefluid dynamicssoft mattermarangoni spreadingmarangoni flowfluid-solid interactionswettingcapillarity phenomenoninterfacial phenomenaliquid mixturestribologyfluid mechanicsapplied physicsfluid sciencefluid flowbiological engineering

Passive Devices for High Throughput Liquid Handling. Bulletin of the American Physical Society (2021)

Samira ShiriMohsin QaziMark MenessesNate Cira

liquid metal coolingliquid-liquid flowpassive devicesfluid scienceengineeringmicrofluidics

Quantifying Rapid Bacterial Evolution and Transmission Within the Mouse Intestine. Cell Host & Microbe (2021)

Kimberly S. VasquezLisa WillisNate J. CiraKatharine M. NgMiguel F. PedroAndrés Aranda-DíazManohary RajendramFeiqiao Brian YuSteven K. HigginbottomNorma NeffGavin SherlockKarina B. XavierStephen R. QuakeJustin L. SonnenburgBenjamin H. GoodKerwyn Casey Huang

pathogensgut microbesrapid bacterial evolutiondigestive tractinfection controlpathogenic bacteriainfectious diseasesbacteriamicrobiologyhost-microbe interactions

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Nate James Cira

Assistant Professor

Cornell University

Affiliations

College of Engineering

School of Biomedical Engineering

Nate James Cira is currently serving as a College Of Engineering Assistant Professor at Cornell University.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Nate James Cira

Cornell University

Assistant Professor

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

Scalable Genotyping of Microbial Colonies. Microbial Genomics (2025)

Arnold ChenNkazi NchindaNate J. Cira

Structure, Motion, and Multiscale Search of Traveling Networks. Nature Communications (2025)

Nate J. CiraMorgan L. PaullShayandev SinhaFabio ZaniniEric Yue MaIngmar H. Riedel-Kruse

Ez-Spots: A Simple and Robust High-Throughput Liquid Handling Platform. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Jon AlboShenghao TanJoee D DenisRebecca Franklin-GuildSamira ShiriKelsi M SandozNate J Cira

High-Throughput, Combinatorial Droplet Generation by Sequential Spraying. Lab on a Chip (2024)

Rena FukudaNate J Cira

Surface Patterned Omniphobic Tiles (Spots): A Versatile Platform for Scalable Liquid Handling. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Samira ShiriMohsin J QaziShenghao TanJon AlboArnold ChenRena FukudaMika S JainNkazi NchindaMark MenessesGhada AhmedArynn O GallegosMahesh K GangishettyDaniel N CongreveNate J Cira

Ultra-High-Throughput Screening of Antimicrobial Combination Therapies Using a Two-Stage Transparent Machine Learning Model. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Margaret M. ReuterKatherine L. LevJon AlboHarkirat Singh AroraNemo LiuShenghao TanMadeline R. ShayDebmalya SarkarAaron RobidaDavid H. ShermanRudy J. RichardsonNate J. CiraSriram Chandrasekaran

Crystallization by Single Diffusion Through Agar Gel. Biophysical Journal (2023)

Mohsin J. QaziNate J. Cira

materials sciencesoft mattercrystal researchsol-gel synthesisdiffusioncrystal growthdispersion sciencecrystal formationcrystallographysingle diffusion

Marangoni Spreading and Contracting Three-Component Droplets on Completely Wetting Surfaces. Proceedings of the National Academy of Sciences (2022)

Dieter A. BaumgartnerSamira ShiriShayandev SinhaStefan KarpitschkaNate J. Cira

Passive Devices for High Throughput Liquid Handling. Bulletin of the American Physical Society (2021)

Samira ShiriMohsin QaziMark MenessesNate Cira

liquid metal coolingliquid-liquid flowpassive devicesfluid scienceengineeringmicrofluidics

Quantifying Rapid Bacterial Evolution and Transmission Within the Mouse Intestine. Cell Host & Microbe (2021)

pathogensgut microbesrapid bacterial evolutiondigestive tractinfection controlpathogenic bacteriainfectious diseasesbacteriamicrobiologyhost-microbe interactions

1
2
3
4
10 / page

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biopolymer

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