Faculty

Institution

Unit

Venue

Mark Alber

Distinguished Professor of Mathematics

University of California, Riverside

Affiliations

College of Natural & Agricultural Sciences (CNAS)

Mathematics

Mark Alber is currently serving as a College Of Natural & Agricultural Sciences (Cnas) Distinguished Professor of Mathematics at University of California, Riverside.

Honors

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Experiences

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Education

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Mark Alber

University of California, Riverside

Distinguished Professor of Mathematics

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biophysics cell biology developmental biology theoretical biology mathematical biology physiology hematology computational biology multiscale modeling vascular biology hemostasis structural biology mathematical physics thrombosis cellular physiology biomedical imaging biomedical modeling membrane biology protein science biophysical modeling integrable systems soft matter mechanical science cell biophysics matrix biology multiscale model fibrin networks computational modeling image segmentation blood platelet computational biophysics thrombus development tissue growth scientific computing numerical simulations avian biology host-microbe interactions applied physiology blood flow biomedical photonics tissue imaging biological cells vertebrate limb development cardiovascular research compression (physics) gene regulation multiscale analysis mathematical biophysics continuum modeling three-dimensional model liver physiology circulatory physiology cellular biology object tracking medical biophysics cell growth protein transport computational medicine transcription regulation discrete stochastic model multiscale models nonlinear subvarieties generalized jacobians hamiltonian flows developmental science cardiovascular physiology optical imaging mechanical behavior physiological research data aggregation large-scale simulations medical image analysis billiard solutions nonlinear pdes multiscale dynamics model integration stem cell homeostasis applied mathematics pattern formation mathematical bioscience quantitative biology systems biology biomedical engineering biological computation modeling and simulation

Video Presentations

Notable Scholarly Works

Notable Federal Grants

Collaborators

DEGAST3D: Learning Deformable 3D Graph Similarity to Track Plant Cells in Unregistered Time Lapse Images. (2025)

Md Shazid IslamArindam DuttaCalvin-Khang TaKevin RodriguezChristian MichaelMark AlberG. Venugopala ReddyAmit K. Roy-Chowdhury

machine learninggraph matchingplant cellscomputer sciencegraph similarity

Balancing Competing Effects of Tissue Growth and Cytoskeletal Regulation During Drosophila Wing Disc Development. Nature Communications (2024)

Nilay KumarJennifer Rangel AmbrizKevin TsaiMayesha Sahir MimMarycruz Flores-FloresWeitao ChenJeremiah J. ZartmanMark Alber

tissue growthcell growthmorphogenesisdevelopmental biologyinsect molecular biologycytoskeletal regulation

Probabilistic and Maximum Entropy Modeling of Chemical Reaction Systems: Characteristics and Comparisons to Mass Action Kinetic Models. The Journal of Chemical Physics (2024)

chemical kineticsprocess controlentropy productionentropyapplied probabilitychemical engineeringkinetics (physics)maximum entropy modelingreaction processaction kinetic modelschemical reaction systemsthermodynamic modellingstochastic processchemical reaction engineeringchemistryapplied mathematicsstatistical mechanicsstochastic partial differential equations

Study of Impacts of Two Types of Cellular Aging on the Yeast Bud Morphogenesis. PLoS Computational Biology (2024)

Kevin TsaiZhen ZhouJiadong YangZhiliang XuShixin XuRoya ZandiNan HaoWeitao ChenMark Alber

yeastbiologymorphogenesisyeast bud morphogenesisdevelopmental biologycell biology

A Multiscale Chemical-Mechanical Model Predicts Impact of Morphogen Spreading on Tissue Growth. npj Systems Biology and Applications (2023)

Alireza RamezaniSamuel BrittonRoya ZandiMark AlberAli NematbakhshWeitao Chen

systems engineeringmultiscale chemical-mechanical modeltissue growthsystems biologymultiscale modelingdevelopmental biology

Combined Computational Modeling and Experimental Study of the Biomechanical Mechanisms of Platelet-Driven Contraction of Fibrin Clots. Communications Biology (2023)

Christian MichaelFrancesco PancaldiSamuel BrittonOleg V. KimAlina D. PeshkovaKhoi VoZhiliang XuRustem I. LitvinovJohn W. WeiselMark Alber

physiologyimmunologybiophysicshematologybiomechanical mechanismsinflammationvascular biologycardiovascular researchfibrin clotscomputational modelingexperimental studyplatelet-driven contractionprotein sciencebiomechanicshemostasiscardiovascular disease

Linking Chemical Signaling to Mechanical Components to Determine Tissue Shape in the Drosophila Wing Imaginal Disc. Biophysical Journal (2023)

Alysha ToomeyNilay KumarMayesha S. MimMark AlberWeitao ChenJeremiah J. Zartman

tissue shapebiophysicsbiomedical engineeringavian biologyimaginal discmammalian biologymorphology (biology)mechanical componentsdevelopmental biologyinsect molecular biologybiomechanicsinsect science

Modeling Study of the Impact of Actomyosin Contractility on Cell Proliferation in the Drosophila Wing Imaginal Disc. Biophysical Journal (2023)

Jennifer Rangel AmbrizNilay KumarKevin TsaiMayesha S. MimWeitao ChenJeremiah J. ZartmanMark Alber

biophysicsavian biologyexperimental biophysicsimaginal discmorphogenesismorphology (biology)cell proliferationbiophysical modelingdevelopmental biologyinsect molecular biologyactomyosin contractilitycell biology

Probabilistic and Entropy Production Modeling of Chemical Reaction Systems: Characteristics and Comparisons to Mass Action Kinetic Models. arXiv (Cornell University) (2023)

chemical kineticsprocess controlentropy productionentropyapplied probabilitychemical engineeringentropy production modelingreaction processchemical reaction systemsstochastic processthermodynamicschemical reaction engineeringchemistryapplied mathematicsprocess engineeringprocess design

Role of Turgor-Pressure Induced Boundary Tension in the Maintenance of the Shoot Apical Meristem of Arabidopsis Thaliana. Journal of The Royal Society Interface (2023)

Christian MichaelMikahl Banwarth-KuhnKevin RodriguezCalvin-Khang TaAmit Roy-ChowdhuryWeitao ChenG. Venugopala ReddyMark Alber

avian biologyplant biologygeneticsbiologyplant physiologymammalian biologyplant reproductionshoot apical meristemecologyplant sciencebotany

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Mark Alber

Distinguished Professor of Mathematics

University of California, Riverside

Affiliations

College of Natural & Agricultural Sciences (CNAS)

Mathematics

Mark Alber is currently serving as a College Of Natural & Agricultural Sciences (Cnas) Distinguished Professor of Mathematics at University of California, Riverside.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Mark Alber

University of California, Riverside

Distinguished Professor of Mathematics

You can click a keyword to filter the displayed items

Video Presentations

Notable Scholarly Works

Notable Federal Grants

Collaborators

DEGAST3D: Learning Deformable 3D Graph Similarity to Track Plant Cells in Unregistered Time Lapse Images. (2025)

Md Shazid IslamArindam DuttaCalvin-Khang TaKevin RodriguezChristian MichaelMark AlberG. Venugopala ReddyAmit K. Roy-Chowdhury

machine learninggraph matchingplant cellscomputer sciencegraph similarity

Balancing Competing Effects of Tissue Growth and Cytoskeletal Regulation During Drosophila Wing Disc Development. Nature Communications (2024)

Nilay KumarJennifer Rangel AmbrizKevin TsaiMayesha Sahir MimMarycruz Flores-FloresWeitao ChenJeremiah J. ZartmanMark Alber

tissue growthcell growthmorphogenesisdevelopmental biologyinsect molecular biologycytoskeletal regulation

Probabilistic and Maximum Entropy Modeling of Chemical Reaction Systems: Characteristics and Comparisons to Mass Action Kinetic Models. The Journal of Chemical Physics (2024)

Study of Impacts of Two Types of Cellular Aging on the Yeast Bud Morphogenesis. PLoS Computational Biology (2024)

Kevin TsaiZhen ZhouJiadong YangZhiliang XuShixin XuRoya ZandiNan HaoWeitao ChenMark Alber

yeastbiologymorphogenesisyeast bud morphogenesisdevelopmental biologycell biology

A Multiscale Chemical-Mechanical Model Predicts Impact of Morphogen Spreading on Tissue Growth. npj Systems Biology and Applications (2023)

Alireza RamezaniSamuel BrittonRoya ZandiMark AlberAli NematbakhshWeitao Chen

systems engineeringmultiscale chemical-mechanical modeltissue growthsystems biologymultiscale modelingdevelopmental biology

Combined Computational Modeling and Experimental Study of the Biomechanical Mechanisms of Platelet-Driven Contraction of Fibrin Clots. Communications Biology (2023)

Christian MichaelFrancesco PancaldiSamuel BrittonOleg V. KimAlina D. PeshkovaKhoi VoZhiliang XuRustem I. LitvinovJohn W. WeiselMark Alber

Linking Chemical Signaling to Mechanical Components to Determine Tissue Shape in the Drosophila Wing Imaginal Disc. Biophysical Journal (2023)

Alysha ToomeyNilay KumarMayesha S. MimMark AlberWeitao ChenJeremiah J. Zartman

tissue shapebiophysicsbiomedical engineeringavian biologyimaginal discmammalian biologymorphology (biology)mechanical componentsdevelopmental biologyinsect molecular biologybiomechanicsinsect science

Modeling Study of the Impact of Actomyosin Contractility on Cell Proliferation in the Drosophila Wing Imaginal Disc. Biophysical Journal (2023)

Jennifer Rangel AmbrizNilay KumarKevin TsaiMayesha S. MimWeitao ChenJeremiah J. ZartmanMark Alber

Probabilistic and Entropy Production Modeling of Chemical Reaction Systems: Characteristics and Comparisons to Mass Action Kinetic Models. arXiv (Cornell University) (2023)

Role of Turgor-Pressure Induced Boundary Tension in the Maintenance of the Shoot Apical Meristem of Arabidopsis Thaliana. Journal of The Royal Society Interface (2023)

Christian MichaelMikahl Banwarth-KuhnKevin RodriguezCalvin-Khang TaAmit Roy-ChowdhuryWeitao ChenG. Venugopala ReddyMark Alber

avian biologyplant biologygeneticsbiologyplant physiologymammalian biologyplant reproductionshoot apical meristemecologyplant sciencebotany

1
2
3
4
5
35
10 / page

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engineering

circulatory physiology

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University of California, Berkeley

biophysics

biomedical engineering

Béla Suki

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Boston University

living tissues

mechanotransduction

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applied physics

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Bhubaneswar Mishra

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biological computation

computational biology

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biomolecular engineering

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biosystems

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applied mathematical modelling

scientific computing

Warren R. Zipfel

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novel imaging method

molecular imaging