Faculty

Institution

Unit

Venue

Warren R. Zipfel

Associate Professor

Cornell University

Affiliations

College of Engineering

School of Biomedical Engineering

Warren R. Zipfel is currently serving as a College Of Engineering Associate Professor at Cornell University.

Honors

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Experiences

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Education

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Warren R. Zipfel

Cornell University

Associate Professor

You can click a keyword to filter the displayed items

biophysics biological imaging biomedical imaging biomedical engineering fluorescence biophotonics microscopy molecular biology cell biology biomedical photonics multiphoton process optical imaging tissue imaging molecular imaging cancer imaging fluorescence spectroscopy novel imaging methods light microscopy light science protein science photomedicine cellular physiology single-molecule detection multiphoton microscopy molecular cell biology matrix biology luminescence lightwave technology neurons photochemistry biophysical review cellular neurobiology microscopy methods plant physiology nanoparticle research second harmonic generation cartilage photosynthesis cancer cells neurotransmission rna biology lab-on-a-chip fiber lasers biomedical optics nonlinear excitation fungal biology mycelial interaction cell biomechanics functional tissue engineering mechanotransduction photophysical properties fiber optics green fluorescent protein microstructured fibers fungal symbiosis fungal physiology gene regulation transcription regulation neovascularization protein x-ray crystallography cell migration water-soluble quantum dots molecular neurobiology neurochemistry plant biochemistry plant molecular biology two-photon fluorescence imaging multiphoton imaging two-photon lithography large-core microstructured fibers nanojoule femtosecond pulses endothelial cells fluorescence collection nonlinear magic fluorescence intermittency intrinsic indicators bioengineering model laboratory investigation

Notable Scholarly Works

Notable Federal Grants

Collaborators

Assessing Cellular Metabolic Dynamics With Nad(P)H ﬂUorescence Polarization Imaging. bioRxiv (Cold Spring Harbor Laboratory) (2025)

Lu LingJack C. CrowleyMatthew L. TanJennie A.M.R KunitakeAdrian A. ShimpiRebecca M. WilliamsLara A. EstroffClaudia FischbachWarren R. Zipfel

fprm readoutsbiophysicsfunctional readoutbiomedical photonicsbiomolecular engineeringcancer imagingfluorescencemolecular metabolismcellular metabolic dynamicsbiological imagingbiomedical imagingcell metabolismnovel imaging methodscellular biochemistrybiochemistrymolecular imaging

Bps2025 - Two-Photon Fluorescence Polarization Imaging of Cellular Nad(P)H Measures Dynamic Metabolic States Within Mda-Mb-231 Metastatic Breast Cancer Cells. Biophysical Journal (2025)

Jack C. CrowleyLu LingMatthew L. TanClaudia FischbachWarren R. Zipfel

fluorescence spectroscopybiophysicsdynamic metabolic statessingle-molecule detectionmolecular metabolismcancer imagingfluorescencecellular nadcell metabolismtranslational molecular imagingbiochemistrymolecular imaging

Spatially Resolved Charge-Transfer Kinetics at the Quantum Dot–Microbe Interface Using Fluorescence Lifetime Imaging Microscopy. Proceedings of the National Academy of Sciences (2025)

Mokshin SuriFarshid Salimi JaziJack C. CrowleyYoungchan ParkBing FuPeng ChenWarren R. ZipfelBuz BarstowTobias Hanrath

nanobiotechnologyfluorescence spectroscopybiophysicsquantum dot–microbe interfacenanoparticle researchphotomedicinebiophotonicsbiomolecular engineeringexcitation energy transferfluorescencequantum dotscharge-transfer kineticsluminescencemolecular imaging

Coarse-Grained Modeling and Dynamics Tracking of Nanoparticles Diffusion in Human Gut Mucus. International Journal of Biological Macromolecules (2024)

Liming ZhaoSandra L. AriasWarren ZipfelIlana L. BritoJingjie Yeo

biophysicsdiffusion-based modelingbiomedical engineeringdiffusion processnanoparticle researchdiffusionnanoparticles diffusionmultiscale modelingnanoparticlesbiological imagingcoarse-grained modelingdispersion sciencehuman gut mucusbiophysical modeling

Fluorescent Protein Tags Affect the Condensation Properties of a Phase-Separating Viral Protein. Molecular Biology of the Cell (2024)

Russell J. R. BarkleyJack C. CrowleyAndrew J. BrodrickWarren R. ZipfelJohn S. L. Parker

virus researchbiophysicsvirus structurefluorescent proteinphase separationgeneral virologyprotein structureµns phase separationmolecular virologyvirologyfluorescencemolecular biologyprotein phase separationviral structural proteinprotein scienceprotein folding

Immunoengineering Can Overcome the Glycocalyx Armour of Cancer Cells. Nature Materials (2024)

Sangwoo ParkMarshall J. ColvilleJustin H. PaekCarolyn R. ShurerArun SinghErica J. SecorCooper J. SailerLing-Ting HuangJoe Chin-Hun KuoMarc C. GoudgeJin SuMinsoo KimMatthew P. DeLisaSriram NeelameghamJan LammerdingWarren R. ZipfelClaudia FischbachHeidi L. ReesinkMatthew J. Paszek

immunologycancer immunosurveillancecancer discoverycancer immunotherapyglycocalyx armourcancer cellstumor microenvironmentimmunomodulationtumor biologyimmunotherapy

Live-Cell Imaging of Rna Pol II and Elongation Factors Distinguishes Competing Mechanisms of Transcription Regulation. Molecular Cell (2024)

Philip VersluisThomas G.W. GrahamVincent EngJonathan EbenezerXavier DarzacqWarren R. ZipfelJohn T. Lis

gene expressiontranscription regulationlive-cell imagingtranscription (biology)molecular cell biologynucleic acidsdevelopmental biologyrna biologyrna pol iicell biology

Nanoengineering Spikey Surfaces: Investigation of Reversible Organizational Control of Surface-Tethered Polypeptide Brushes. Langmuir (2024)

Yuming HuangHyunseok KimLuis Adrián Padilla SalasWarren R. ZipfelSu-Mi HurChristopher K. Ober

polymeric surfacebiophysicssmart polymersself-assemblysurface functionalizationaggregation behaviorbiomolecular engineeringbiopolymerspollen grainsspikey surfacenanostructured polymerspolymer sciencebiofabricationbiological engineeringpolymer self-assembly

Plant Membrane-On-A-Chip: A Platform for Studying Plant Membrane Proteins and Lipids. ACS Applied Materials & Interfaces (2024)

Martin StueblerZachary A. ManzerHan-Yuan LiuJulia MillerAnnett RichterSrinivasan KrishnanEkaterina SelivanovitchBarituziga BanunaGeorg JanderErik ReimhultWarren R. ZipfelAdrienne H. K. RoederMiguel A. PiñerosSusan Daniel

biological macromoleculesbiophysicsmembrane vesiclesproteinlipid interactionmembranesmembrane systemslipidsarabidopsis formbiomolecular engineeringmembrane proteinsmembrane sciencemembrane structurebiomoleculesprotein sciencezea mays

Spatial Mapping of Mobile Genetic Elements and Their Bacterial Hosts in Complex Microbiomes. Nature Microbiology (2024)

Benjamin GrodnerHao ShiOwen FarchioneAlbert C. VillIoannis NtekasPeter J. DieboldDavid T. WuChia-Yu ChenDavid M. KimWarren R. ZipfelIlana L. BritoIwijn De Vlaminck

microbiomeantimicrobial agentsgenome biologymicrobial diversityantimicrobial resistance genesapplied microbiologybiologyenvironmental microbiologymicrobial ecologymolecular ecologymicrobial geneticsspatial mappingmobile genetic elementsbacteriahost bacteriamicrobiology

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Warren R. Zipfel

Associate Professor

Cornell University

Affiliations

College of Engineering

School of Biomedical Engineering

Warren R. Zipfel is currently serving as a College Of Engineering Associate Professor at Cornell University.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Warren R. Zipfel

Cornell University

Associate Professor

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

Assessing Cellular Metabolic Dynamics With Nad(P)H ﬂUorescence Polarization Imaging. bioRxiv (Cold Spring Harbor Laboratory) (2025)

Lu LingJack C. CrowleyMatthew L. TanJennie A.M.R KunitakeAdrian A. ShimpiRebecca M. WilliamsLara A. EstroffClaudia FischbachWarren R. Zipfel

Bps2025 - Two-Photon Fluorescence Polarization Imaging of Cellular Nad(P)H Measures Dynamic Metabolic States Within Mda-Mb-231 Metastatic Breast Cancer Cells. Biophysical Journal (2025)

Jack C. CrowleyLu LingMatthew L. TanClaudia FischbachWarren R. Zipfel

Spatially Resolved Charge-Transfer Kinetics at the Quantum Dot–Microbe Interface Using Fluorescence Lifetime Imaging Microscopy. Proceedings of the National Academy of Sciences (2025)

Mokshin SuriFarshid Salimi JaziJack C. CrowleyYoungchan ParkBing FuPeng ChenWarren R. ZipfelBuz BarstowTobias Hanrath

Coarse-Grained Modeling and Dynamics Tracking of Nanoparticles Diffusion in Human Gut Mucus. International Journal of Biological Macromolecules (2024)

Liming ZhaoSandra L. AriasWarren ZipfelIlana L. BritoJingjie Yeo

Fluorescent Protein Tags Affect the Condensation Properties of a Phase-Separating Viral Protein. Molecular Biology of the Cell (2024)

Russell J. R. BarkleyJack C. CrowleyAndrew J. BrodrickWarren R. ZipfelJohn S. L. Parker

Immunoengineering Can Overcome the Glycocalyx Armour of Cancer Cells. Nature Materials (2024)

immunologycancer immunosurveillancecancer discoverycancer immunotherapyglycocalyx armourcancer cellstumor microenvironmentimmunomodulationtumor biologyimmunotherapy

Live-Cell Imaging of Rna Pol II and Elongation Factors Distinguishes Competing Mechanisms of Transcription Regulation. Molecular Cell (2024)

Philip VersluisThomas G.W. GrahamVincent EngJonathan EbenezerXavier DarzacqWarren R. ZipfelJohn T. Lis

gene expressiontranscription regulationlive-cell imagingtranscription (biology)molecular cell biologynucleic acidsdevelopmental biologyrna biologyrna pol iicell biology

Nanoengineering Spikey Surfaces: Investigation of Reversible Organizational Control of Surface-Tethered Polypeptide Brushes. Langmuir (2024)

Yuming HuangHyunseok KimLuis Adrián Padilla SalasWarren R. ZipfelSu-Mi HurChristopher K. Ober

Plant Membrane-On-A-Chip: A Platform for Studying Plant Membrane Proteins and Lipids. ACS Applied Materials & Interfaces (2024)

Spatial Mapping of Mobile Genetic Elements and Their Bacterial Hosts in Complex Microbiomes. Nature Microbiology (2024)

Benjamin GrodnerHao ShiOwen FarchioneAlbert C. VillIoannis NtekasPeter J. DieboldDavid T. WuChia-Yu ChenDavid M. KimWarren R. ZipfelIlana L. BritoIwijn De Vlaminck

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