Faculty

Institution

Unit

Venue

Jeremy Coate

Visiting Associate Professor of Biology

Reed College

Affiliations

Laboratories Of Kleinholtz Biological

Department Of Biology

History and Social Sciences

History

Reed College

Jeremy Coate is currently serving as a Biology Visiting Associate Professor of Biology at Reed College.

Honors

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Experiences

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Education

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Jeremy Coate

Reed College

Visiting Associate Professor of Biology

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genetics biology genomics genome biology molecular evolution molecular genetics plant science plant genetics plant genomics evolutionary biology plant biology gene expression genetic variation transcriptome integrative plant biology plant molecular biology plant cells plant physiology molecular plant pathology botany functional genomics molecular ecology experimental botany transcriptomics technology comparative genomics plant cytology chromosome biology cytogenetics gene dosage developmental biology systematics molecular cell biology plant disease molecular plant-microbe interactions plant development genome analysis genome sequencing plant immunity plant-microbe interactions plant-pathogen interactions cultivated soybean whole-genome duplication nucleic acids heredity sequence analysis synthetic plant biology plant reproduction gene regulation transcription regulation molecular regulation cell size transcriptome size glycine species genome duplication molecular informatics plant biotechnology cell cycle genome structure genetic diversity long non-coding rna cell wall chromosomal rearrangements plant metabolism single-cell analysis gene expression profiling mutation-based testing next-generation sequencing genome doubling arabidopsis sepal organ size transcriptome downsizing whole transcriptome size duplicate gene expression plant species plant genomes gene space duplication bioinformatics crop protection plant pathology agricultural biotechnology paleoecology palaeontologia electronica forensic genetics quantitative genetics systems biology ecology symbiosis genetic engineering paleobiology population genetics systematics (systems theory) historical biology biogeography biodiversity genetic recombination palynology phylogenetics tropical plant pathology molecular biology paleontology systematic palaeontology

Notable Scholarly Works

Notable Federal Grants

Collaborators

Spontaneous Mutations Occur More in Highly Transcribed Regions in Daphnia. Genome Biology and Evolution (2026)

geneticsbiologymolecular geneticsgenomicsgenetic mechanismshereditymolecular ecologyspontaneous mutationsgenome biologygene structuregene evolutiongenetic variationplo biologymolecular evolutiontranscription (biology)developmental system

EDITORIAL: Cellular Heterogeneity in Plants. Frontiers in Plant Science (2024)

Kengo MorohashiAmir H. AhkamiJeremy E. CoateMarc Libault

plant sciencecellular heterogeneityplant physiologycell biologyplant biology

Tabula Glycine: The Whole-Soybean Single-Cell Resolution Transcriptome Atlas. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Sergio Alan Cervantes-PérezSandra ThibivilliersSahand AminiJulie M. PelletierIan MeyerHengping XuSutton TennantPengchong MaChandler M. SprueillAndrew D. FarmerJeremy E. CoateHilde NelissenQiuming YaoOlivier C. MartinErik J. AmézquitaRobert B. GoldbergJohn J. HaradaMarc Libault

single-cell analysisplant sciencetranscriptomics technologytabula glycinetranscriptomecell biologyplant biologymarine biology

Beyond Transcript Concentrations: Quantifying Polyploid Expression Responses Per Biomass, Per Genome, and Per Cell With Rna-Seq. Methods in molecular biology (2023)

geneticsgene expressionpolyploid expression responsesgenomicsnucleic acidsmolecular biologygene expression profilinggenome biologytranscriptomics technologybeyond transcript concentrationstranscriptometranscription (biology)

EDITORIAL: Artificial Polyploidy in Plants, Volume II. Frontiers in Plant Science (2023)

biologyplant scienceplant cellsexperimental botanyplant reproductionartificial polyploidybotanyplant cytology

Estimating Somatic Mutation Rates by Bottlenecked Duplex Sequencing in Non-Model Organisms: Daphnia Magna as a Case Study. Journal of Biological Methods (2022)

geneticspopulation geneticsbiologymolecular ecologynext-generation sequencingdaphnia magnamutation-based testinggenetic recombinationgenome biologysomatic mutation ratesgene evolutionbottlenecked duplex sequencinggenetic variationevolutionary biologymolecular evolution

Polyploidy and Microbiome Associations Mediate Similar Responses to Pathogens in Arabidopsis. Current Biology (2022)

Elijah C. MehlferberMichael J. SongJulianne Naomi PelaezJohan JaenischJeremy E. CoateBritt KoskellaCarl J. Rothfels

geneticsplant immunitybiologyplant sciencemicrobiologymicrobial pathogenesisgenomicsplant pathologymolecular plant-microbe interactionsplant diseasemicrobiomemolecular plant pathologyplant-pathogen interactionssimilar responsessymbiosismicrobiome associationsplant-microbe interactionsmetagenomics

Thermal Stress and Mutation Accumulation Increase Heat Shock Protein Expression in Daphnia. Evolutionary Ecology (2022)

geneticsbiologymolecular cell biologygene expressionmolecular geneticsthermal stressmolecular biologymorphogenesismolecular and cellular biologymolecular regulation

Fifteen Compelling Open Questions in Plant Cell Biology. The Plant Cell (2021)

Adrienne H K RoederMarisa S OteguiRam DixitCharles T AndersonChristine FaulknerYan ZhangMaria J HarrisonCharlotte KirchhelleGohta GoshimaJeremy E CoateJeff J DoyleOlivier HamantKeiko SugimotoLiam DolanHeather MeyerDavid W EhrhardtArezki BoudaoudCarlos Messina

plant developmentbiologyopen questionsplant cellsplant sciencecell divisioncell wallplant morphogenesisdevelopmental biologymorphogenesiscompelling open questionscytoskeletonbotanycell biologyplant cytologycell and molecular biology

Heat Shock Protein Gene Expression is Higher and More Variable With Thermal Stress and Mutation Accumulation in Daphnia. bioRxiv (Cold Spring Harbor Laboratory) (2021)

molecular geneticsgene structuremolecular and cellular biologydevelopmental systemgeneticsprotein geneticstranscription (biology)molecular cell biologygene expressiongene regulationproteome researchextreme environmentsmolecular regulationcell and molecular biologymutation accumulationthermal stresstranscription factorsmolecular biologytranscription regulation

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Jeremy Coate

Visiting Associate Professor of Biology

Reed College

Affiliations

Laboratories Of Kleinholtz Biological

Department Of Biology

History and Social Sciences

History

Reed College

Jeremy Coate is currently serving as a Biology Visiting Associate Professor of Biology at Reed College.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Jeremy Coate

Reed College

Visiting Associate Professor of Biology

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

Spontaneous Mutations Occur More in Highly Transcribed Regions in Daphnia. Genome Biology and Evolution (2026)

EDITORIAL: Cellular Heterogeneity in Plants. Frontiers in Plant Science (2024)

Kengo MorohashiAmir H. AhkamiJeremy E. CoateMarc Libault

plant sciencecellular heterogeneityplant physiologycell biologyplant biology

Tabula Glycine: The Whole-Soybean Single-Cell Resolution Transcriptome Atlas. bioRxiv (Cold Spring Harbor Laboratory) (2024)

single-cell analysisplant sciencetranscriptomics technologytabula glycinetranscriptomecell biologyplant biologymarine biology

Beyond Transcript Concentrations: Quantifying Polyploid Expression Responses Per Biomass, Per Genome, and Per Cell With Rna-Seq. Methods in molecular biology (2023)

EDITORIAL: Artificial Polyploidy in Plants, Volume II. Frontiers in Plant Science (2023)

biologyplant scienceplant cellsexperimental botanyplant reproductionartificial polyploidybotanyplant cytology

Estimating Somatic Mutation Rates by Bottlenecked Duplex Sequencing in Non-Model Organisms: Daphnia Magna as a Case Study. Journal of Biological Methods (2022)

Polyploidy and Microbiome Associations Mediate Similar Responses to Pathogens in Arabidopsis. Current Biology (2022)

Elijah C. MehlferberMichael J. SongJulianne Naomi PelaezJohan JaenischJeremy E. CoateBritt KoskellaCarl J. Rothfels

Thermal Stress and Mutation Accumulation Increase Heat Shock Protein Expression in Daphnia. Evolutionary Ecology (2022)

geneticsbiologymolecular cell biologygene expressionmolecular geneticsthermal stressmolecular biologymorphogenesismolecular and cellular biologymolecular regulation

Fifteen Compelling Open Questions in Plant Cell Biology. The Plant Cell (2021)

Heat Shock Protein Gene Expression is Higher and More Variable With Thermal Stress and Mutation Accumulation in Daphnia. bioRxiv (Cold Spring Harbor Laboratory) (2021)

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