Faculty

Institution

Unit

Venue

Julian Catchen

Associate Professor

UIUC

Affiliations

College of Liberal Arts & Sciences

School of Integrative Biology

Department of Evolution, Ecology, and Behavior

Julian Catchen is currently serving as a College Of Liberal Arts & Sciences Associate Professor at Uiuc.

Honors

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Experiences

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Education

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Julian Catchen

UIUC

Associate Professor

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genetics genomics genome biology evolutionary biology molecular ecology biology molecular evolution population genetics genetic variation bioinformatics population genomics phylogenetics genome analysis sequence assembly evolutionary genetics fish biology molecular genetics adaptation comparative genomics molecular evolutionary ecology genetic diversity statistical genetics phylogenomics systematics high throughput sequencing heredity ecology evolution molecular informatics gene evolution computational genomics next-generation sequencing marine genomics nucleic acids genome sequencing speciation genome structure ecology behavioral ecology developmental system molecular cell biology long-read sequencing sexual selection reference genome developmental cell evolutionary applications genome studies evolutionary significance molecular adaptation genomic mechanisms dna sequencing mammalian biology sequence analysis phylogenetic methods biological evolution developmental genetics evolutionary developmental biology natural selection forensic genetics genetic analysis ecophysiology teleost genome duplication genome duplication ancestral genomes sequence capture gene loss dna sequences freshwater fish young ponds behavioral isolation amplification noise pcr amplification amplification distortions pitcher-plant mosquito analysis tool smoothed sliding window powerful software platforms evolutionary ecology

Notable Scholarly Works

Notable Federal Grants

Collaborators

Genomic Introgression Between Critically Endangered and Stable Species of Darwin's Tree Finches on the Galapagos Islands. Evolutionary Applications (2025)

Rachael Y. DudaniecSonu YadavJulian CatchenSonia Kleindorfer

genetic admixtureprivate allelesgenetic diversitytree finchesconservation geneticsspeciationmolecular ecologygenetic variationbiologyphylogeneticsavian biologystable speciesevolutionary biologymolecular evolutionpopulation geneticsevolutionary geneticsgeneticsornithology

Combining Population Genomics and Transcriptomics to Identify Signatures of Metal Tolerance in Brown Trout Inhabiting Metal-Polluted Rivers. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Josephine R ParisR Andrew KingJoan Ferrer ObiolSophie ShawAnke LangeVincent BourretPatrick B HamiltonDarren RoweLauren V LaingAudrey FarbosKaren A MooreMauricio A UrbinaJulian M CatchenRod W WilsonNicolas R BuryEduarda M SantosJamie R Stevens

aquatic ecosystemsmetal contaminationmetal tolerancefish biologybioactive metalmetal toxicitytrace metalstranscriptomic signaturesgenomicsmolecular ecologybiologyfreshwater ecosystemswater pollutionfreshwater biologygeneticsmetal homeostasis

Compacted Hair in Broken Teeth Reveals Dietary Prey of Historic Lions. Current Biology (2024)

Alida de FlaminghThomas P GnoskeJulian C Kerbis PeterhansVelizar A SimeonovskiNduhiu GitahiOgeto MwebiBernard R AgwandaJulian M CatchenAlfred L RocaRipan S Malhi

animal studiesmammalogyzoologyzooarchaeologybiologyhistoric lionsbioarchaeologyevolutionary biologywildlife biology

Comparative Genomics of Xanthomonas Cucurbitae Isolates Collected From Midwestern United States Pumpkin Fields. Plant Pathology (2024)

Rikky RaiKayla M. VittoreJulius PasionMaria L. MalvinoJonathan D. MasonQiong LiuSalisu SulleyMohammad BabadoostJulian M. CatchenSarah R. Hind

dna sequencingplant diseaseinfectious diseasesmolecular plant-microbe interactionsmolecular plant pathologypathogenic bacteriapathogen characterizationplanta virulence assaysplant healthgenomicsmicrobiologypathogensplant pathologyplant-pathogen interactionsdifferential virulenceplant-microbe interactionsgeneticsmicrobial pathogenesis

Highly Resolved Genome Assembly and Comparative Transcriptome Profiling Reveal Genes Related to Developmental Stages of Tapeworm Ligula Intestinalis. Proceedings of the Royal Society B Biological Sciences (2024)

Masoud NazarizadehMilena NovákováMarie DrábkováJulian CatchenPeter D. OlsonJan Štefka

transcriptome profilinginvertebrate pathologygenome sequencingimmune evasiongenomicsgenome biologymolecular ecologymicrobiologybiologyreference genomeoxford nanopore technologiesmolecular evolutiongenetics

KLUMPY: A Tool to Evaluate the Integrity of Long‐Read Genome Assemblies and Illusive Sequence Motifs. Molecular Ecology Resources (2024)

Giovanni MadrigalBushra Fazal MinhasJulian Catchen

sequence assemblyantifreeze glycoproteinnucleic acidsgenomicsgenome biologyabsent genebiologyreference genomeslong-read sequencingmolecular biologymarine genomicsmolecular evolutiongenome structurebioinformaticsgenetics

KLUMPY: A Tool to Evaluate the Integrity of Long-Read Genome Assemblies and Illusive Sequence Motifs. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Giovanni MadrigalBushra Fazal MinhasJulian Catchen

sequence assemblynucleic acidsfunctional genomicsgenomicsgenome biologyabsent genebiologyreference genomeslong-read sequencingmolecular biologyafgp locusgenome structurebioinformaticsgenetics

Ongoing Introgression of a Secondary Sexual Plumage Trait in a Stable Avian Hybrid ZoneintrogresióN Continua De Plumaje Sexual Secundario En Una Zona HíBrida Aviar Estable. Evolution (2024)

Kira M LongAngel G Rivera-ColónKevin F P BennettJulian M CatchenMichael J BraunJeffrey D Brawn

hybrid zonesevolutionary ecologysexual selectionhybrid zonespeciationmolecular ecologygenetic variationbiologyavian biologyavian evolutionevolutionary biologybehavioral ecologypopulation geneticsgeneticsornithology

The Genome of the Cryopelagic Antarctic Bald Notothen, Trematomus Borchgrevinki. G3 Genes Genomes Genetics (2024)

Niraj RayamajhiAngel G Rivera-ColónBushra Fazal MinhasC-H Christina ChengJulian M Catchen

antarctic bald notothengenome architecturegenomicsgenome biologymolecular ecologycomparative genomicsbiologysystematicsscaffold n50evolutionary biologymarine genomicsmolecular evolutionphylogenomicsgenome structuregenetics

The Genome of the Cryopelagic Antarctic Bald Notothen, Trematomus Borchgrevinki. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Niraj RayamajhiAngel G. Rivera-ColónBushra Fazal MinhasC.-H. Christina ChengJulian M. Catchen

antarctic bald notothensequence assemblygenome architecturegenomicsgenome biologymolecular ecologycomparative genomicsreference genomesystematicsscaffold n50evolutionary biologymolecular evolutionphylogenomicsgenome structurebioinformaticsgenetics

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Julian Catchen

Associate Professor

UIUC

Affiliations

College of Liberal Arts & Sciences

School of Integrative Biology

Department of Evolution, Ecology, and Behavior

Julian Catchen is currently serving as a College Of Liberal Arts & Sciences Associate Professor at Uiuc.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Julian Catchen

UIUC

Associate Professor

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

Genomic Introgression Between Critically Endangered and Stable Species of Darwin's Tree Finches on the Galapagos Islands. Evolutionary Applications (2025)

Rachael Y. DudaniecSonu YadavJulian CatchenSonia Kleindorfer

Combining Population Genomics and Transcriptomics to Identify Signatures of Metal Tolerance in Brown Trout Inhabiting Metal-Polluted Rivers. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Compacted Hair in Broken Teeth Reveals Dietary Prey of Historic Lions. Current Biology (2024)

Alida de FlaminghThomas P GnoskeJulian C Kerbis PeterhansVelizar A SimeonovskiNduhiu GitahiOgeto MwebiBernard R AgwandaJulian M CatchenAlfred L RocaRipan S Malhi

animal studiesmammalogyzoologyzooarchaeologybiologyhistoric lionsbioarchaeologyevolutionary biologywildlife biology

Comparative Genomics of Xanthomonas Cucurbitae Isolates Collected From Midwestern United States Pumpkin Fields. Plant Pathology (2024)

Rikky RaiKayla M. VittoreJulius PasionMaria L. MalvinoJonathan D. MasonQiong LiuSalisu SulleyMohammad BabadoostJulian M. CatchenSarah R. Hind

Masoud NazarizadehMilena NovákováMarie DrábkováJulian CatchenPeter D. OlsonJan Štefka

KLUMPY: A Tool to Evaluate the Integrity of Long‐Read Genome Assemblies and Illusive Sequence Motifs. Molecular Ecology Resources (2024)

Giovanni MadrigalBushra Fazal MinhasJulian Catchen

KLUMPY: A Tool to Evaluate the Integrity of Long-Read Genome Assemblies and Illusive Sequence Motifs. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Giovanni MadrigalBushra Fazal MinhasJulian Catchen

sequence assemblynucleic acidsfunctional genomicsgenomicsgenome biologyabsent genebiologyreference genomeslong-read sequencingmolecular biologyafgp locusgenome structurebioinformaticsgenetics

Ongoing Introgression of a Secondary Sexual Plumage Trait in a Stable Avian Hybrid ZoneintrogresióN Continua De Plumaje Sexual Secundario En Una Zona HíBrida Aviar Estable. Evolution (2024)

Kira M LongAngel G Rivera-ColónKevin F P BennettJulian M CatchenMichael J BraunJeffrey D Brawn

The Genome of the Cryopelagic Antarctic Bald Notothen, Trematomus Borchgrevinki. G3 Genes Genomes Genetics (2024)

Niraj RayamajhiAngel G Rivera-ColónBushra Fazal MinhasC-H Christina ChengJulian M Catchen

The Genome of the Cryopelagic Antarctic Bald Notothen, Trematomus Borchgrevinki. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Niraj RayamajhiAngel G. Rivera-ColónBushra Fazal MinhasC.-H. Christina ChengJulian M. Catchen

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