Faculty

Institution

Unit

Venue

James B. Herrick

Associate Professor Emeritus

James Madison University

Affiliations

College of Science and Math

Department of Biology

James B. Herrick is currently serving as a College Of Science And Math Associate Professor Emeritus at James Madison University.

Honors

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Experiences

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Education

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James B. Herrick

James Madison University

Associate Professor Emeritus

You can click a keyword to filter the displayed items

microbiology environmental microbiology applied microbiology microbial ecology bacteria genomics soil microbiology environmental science microbial genetics ecology bioremediation bioinformatics clinical microbiology molecular metabolism bacteriology microbiological degradation horizontal transfer biological engineering microbial cell factory genome biology microbial contamination medical microbiology gene transfer high throughput sequencing microbial physiology naphthalene dioxygenase gene naphthalene catabolism genes coal tar-contaminated site distributed analysis tool synthetic biology conservation biology gene expression food microbiology avian biology biological conservation soil biology environmental dna nature science advance systematics biomedical informatics scientific data microbial risk assessment quantitative microbiology metal contamination pathogen transmission molecular microbiology genome analysis sequence analysis drug development antibiotic resistance pesticide resistance nature-based solutions dna analysis natural selection translational bioinformatics next-generation sequencing computational genomics pathogen detection pathogen characterization metabolic models metabolic pathway analysis microbial systematics extremophiles decontamination rapid extraction indigenous microorganisms quantitative cell lysis microbial dna natural horizontal transfer batrachochytrium dendrobatidis amphibian cutaneous bacteria amphibian hosts soil bioaugmentation adjacent soil environments pah-degrading bacterial guilds antimicrobial resistance

Notable Scholarly Works

Notable Federal Grants

Collaborators

A Cure for Salmonella: A Laboratory Course in Pathogen Microbiology and Genomics. CourseSource (2021)

Sophie K. JurgensenJoseph HarshJames B. Herrick

microbiologylaboratory coursegenomicspathogen microbiology

GALAXYTRAKR: A Distributed Analysis Tool for Public Health Whole Genome Sequence Data Accessible to Non-Bioinformaticians. BMC Genomics (2021)

Jayanthi GangiredlaHugh RandDaniel BenisattoJustin PayneCharles StrittmatterJimmy SandersWilliam J. WolfgangKevin LibuitJames B. HerrickMelanie PraratMagaly ToroThomas FarrellErrol Strain

public healthgenome analysissequence analysisgenomicsdata sciencedistributed analysis toolbioinformatics

GALAXYTRAKR: A Distributed Analysis Tool for Public Health Whole Genome Sequence Data Accessible to Non-Bioinformaticians. BMC Genomics (2021)

biostatisticstranslational bioinformaticscomputational biologybiomedical informaticsnext-generation sequencinggenomicshigh throughput sequencingdistributed analysis tooldata sciencescientific datasystems biologycomputational genomicsbioinformaticsgenome biology

Genomics of Environmental Salmonella: Engaging Students in the Microbiology and Bioinformatics of Foodborne Pathogens. Frontiers in Microbiology (2021)

pathogen detectionengaging studentsinfectious diseasesenvironmental microbiologypathogenic bacteriamicrobiologypathogensenvironmental salmonellafoodborne pathogensapplied microbiologypathogen characterization

Genomics of Environmental Salmonella: Engaging Students in the Microbiology and Bioinformatics of Foodborne Pathogens. Frontiers in Microbiology (2021)

Noah A. GreenmanSophie K. JurgensenCharles P. HolmesCurtis J. KapsakRaechel E. DavisWilliam M. MazaDesiree EdembaBethany A. EsserSelena M. HiseTara N. KeenHunter G. LarsonDominique J. LockwoodBrian WangJoseph A. HarshJames B. Herrick

genomicsmicrobiologyenvironmental salmonellafoodborne pathogensenvironmental microbiologybioinformatics

Coselection for Resistance to Multiple Late-Generation Human Therapeutic Antibiotics Encoded on Tetracycline Resistance Plasmids Captured From Uncultivated Stream and Soil Bacteria. Journal of Applied Microbiology (2014)

J.B. HerrickR. HaynesS. HeringaJ.M. BrooksL.T. Sobota

drug developmentpharmacologyuncultivated streamclinical microbiologymedical microbiologyinfectious diseasesantibiotic resistancetetracycline resistance plasmidsdrug discoverypesticide resistancemicrobiologydrug resistancebacteriologyapplied microbiologyenvironmental microbiologyantimicrobial resistancebiotechnologysoil bacteriaantibiotics

Soil Bioaugmentation With Amphibian Cutaneous Bacteria Protects Amphibian Hosts From Infection by Batrachochytrium Dendrobatidis. Biological Conservation (2012)

Carly R. MuletzJillian M. MyersRickie J. DomangueJames B. HerrickReid N. Harris

batrachochytrium dendrobatidissoil microbiologyamphibian cutaneous bacteriaenvironmental scienceavian biologyamphibian hostsecologysoil bioaugmentationenvironmental microbiologybiological conservationconservation biologysoil biology

A Simple, Rapid Method for Extracting Large Plasmid Dna From Bacteria. Nature Precedings (2007)

Spencer HeringaJonathan MonroeJames Herrick

environmental dnametagenomicsenvironmental sciencehigh throughput sequencingnaturerapid methodgenomicsnature-based solutionsmicrobial geneticsmolecular biologydna analysisbiological engineeringmicrobiologynatural selectionscience advanceapplied microbiologygenome biologybiostatisticsgenetic engineeringbiofilmssystematicsecology

Horizontal Transfer of Phnac Dioxygenase Genes Within One of Two Phenotypically and Genotypically Distinctive Naphthalene-Degrading Guilds From Adjacent Soil Environments. Applied and Environmental Microbiology (2003)

Mark S. WilsonJames B. HerrickChe Ok JeonDavid E. HinmanEugene L. Madsen

horizontal transfersoil microbiologyenvironmental microbiologyadjacent soil environmentsmicrobiologyapplied microbiologymicrobial ecology

Plasmids Responsible for Horizontal Transfer of Naphthalene Catabolism Genes Between Bacteria at a Coal Tar-Contaminated Site Are Homologous to Pdtg1 From Pseudomonas Putida Ncib 9816-4. Applied and Environmental Microbiology (1998)

K. G. Stuart-KeilA. M. HohnstockK. P. DreesJ. B. HerrickE. L. Madsen

horizontal transferclinical microbiologymetal contaminationnaphthalene catabolism genespathogen transmissionmicrobial contaminationmolecular microbiologyimmunologycoal tar-contaminated sitegene transfermicrobiologybacteriamolecular biologygene expressionenvironmental microbiology

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James B. Herrick

Associate Professor Emeritus

James Madison University

Affiliations

College of Science and Math

Department of Biology

James B. Herrick is currently serving as a College Of Science And Math Associate Professor Emeritus at James Madison University.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

James B. Herrick

James Madison University

Associate Professor Emeritus

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

A Cure for Salmonella: A Laboratory Course in Pathogen Microbiology and Genomics. CourseSource (2021)

Sophie K. JurgensenJoseph HarshJames B. Herrick

microbiologylaboratory coursegenomicspathogen microbiology

GALAXYTRAKR: A Distributed Analysis Tool for Public Health Whole Genome Sequence Data Accessible to Non-Bioinformaticians. BMC Genomics (2021)

Jayanthi GangiredlaHugh RandDaniel BenisattoJustin PayneCharles StrittmatterJimmy SandersWilliam J. WolfgangKevin LibuitJames B. HerrickMelanie PraratMagaly ToroThomas FarrellErrol Strain

public healthgenome analysissequence analysisgenomicsdata sciencedistributed analysis toolbioinformatics

GALAXYTRAKR: A Distributed Analysis Tool for Public Health Whole Genome Sequence Data Accessible to Non-Bioinformaticians. BMC Genomics (2021)

Genomics of Environmental Salmonella: Engaging Students in the Microbiology and Bioinformatics of Foodborne Pathogens. Frontiers in Microbiology (2021)

genomicsmicrobiologyenvironmental salmonellafoodborne pathogensenvironmental microbiologybioinformatics

J.B. HerrickR. HaynesS. HeringaJ.M. BrooksL.T. Sobota

Soil Bioaugmentation With Amphibian Cutaneous Bacteria Protects Amphibian Hosts From Infection by Batrachochytrium Dendrobatidis. Biological Conservation (2012)

Carly R. MuletzJillian M. MyersRickie J. DomangueJames B. HerrickReid N. Harris

A Simple, Rapid Method for Extracting Large Plasmid Dna From Bacteria. Nature Precedings (2007)

Spencer HeringaJonathan MonroeJames Herrick

Mark S. WilsonJames B. HerrickChe Ok JeonDavid E. HinmanEugene L. Madsen

horizontal transfersoil microbiologyenvironmental microbiologyadjacent soil environmentsmicrobiologyapplied microbiologymicrobial ecology

K. G. Stuart-KeilA. M. HohnstockK. P. DreesJ. B. HerrickE. L. Madsen

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niche specialization

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Salina Parveen

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