Faculty

Institution

Unit

Venue

Gabor Marth

Professor

University of Utah

Affiliations

Spencer Fox Eccles School of Medicine

Human Genetics

Gabor Marth is currently serving as a Human Genetics Professor at University of Utah.

Honors

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Experiences

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Education

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Gabor Marth

University of Utah

Professor

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genomics genetics bioinformatics genome biology cancer research oncology molecular biology human genetics cancer biology cancer genomics medical genetics cancer genetics population genetics medicinal research evolutionary biology informatics data science molecular cancer next-generation sequencing computational genomics genome analysis genome sequencing cancer care sequence analysis cancer treatment genetic variation mammalian biology population genomics psychiatric genetics human variation somatic variant disease gene identification host genetics neurodevelopmental disorders genome-wide association studies variant interpretation syndromic autism mutagenesis genetic disorders dna sequencing genomic medicine autism spectrum disorder subclonal evolution forensic genetics heredity adaptation molecular psychiatry surgical oncology thoracic oncology biomedical informatics sequence alignment host-parasite relationships long-read sequencing variant discovery next-generation sequencing technologies resistant cancer phenotypes differential gene expression web tool oncogenes cancer discovery nature method haplotype determination microarray data analysis personal genomics genetic foundation human polymorphisms germ cells variant call format human genomes genomes project integrated map short-read sequencing haplotype-based variant detection single nucleotide polymorphisms haplotype-resolved structural variation multi-platform discovery biostatistics bioinformatics database biological data visual analytics

Video Presentations

Notable Scholarly Works

Notable Federal Grants

Collaborators

A Bayesian Framework to Study Tumor Subclone–Specific Expression by Combining Bulk Dna and Single-Cell Rna Sequencing Data. Genome Research (2024)

Yi QiaoXiaomeng HuangPhilip J. MoosJonathan M. AhmannAnthony D. PomicterMichael W. DeiningerJohn C. ByrdJennifer A. WoyachDeborah M. StephensGabor T. Marth

immunologybioinformaticstumor biologygenome sequencinggenomicscancer researchmolecular biologybayesian frameworkmolecular cancerbulk dnacancer biologygenome biologytumor subclone-specific expressionbiostatisticsgenome analysisoncologysequence analysiscancer genomicsbayesian analysis

Abstract 907: Screendl: A Transfer Learning Framework Integrating Tumor Omics and Functional Drug Screening for Personalized Clinical Drug Response Prediction. Cancer Research (2024)

Casey SedermanTonya Di SeraYi QiaoXiaomeng HuangBryan E. WelmAlana L. WelmGabor Marth

transfer learningtumor omicscancer researchpharmacologymedicinepersonalized medicinehealth sciencesoncologycancer biology

A Precision Oncology-Focused Deep Learning Framework for Personalized Selection of Cancer Therapy. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Casey SedermanChieh-Hsiang YangEmilio Cortes-SanchezTony Di SeraXiaomeng HuangSandra D. SchererLing ZhaoZhengtao ChuEliza R. WhiteAaron AtkinsonJadon WagstaffKatherine E. VarleyMichael T. LewisYi QiaoBryan E. WelmAlana L. WelmGabor T. Marth

precision medicineoncologytumor targetingdeep learningcancer therapysystems biologycancer genomicspersonalized medicinepersonalized selection

Clonal Dynamics of Aggressive Systemic Mastocytosis on Avapritinib Therapy. Blood Cancer Journal (2024)

Xiaomeng HuangAnthony D. PomicterJonathan AhmannYi QiaoOpal S. ChenTracy I. GeorgeNataly Cruz-RodriguezSameer Ahmad GuruGabor T. MarthMichael W. Deininger

avapritinib therapyaggressive systemic mastocytosisclonal dynamicshematology

Differences in Molecular Sampling and Data Processing Explain Variation Among Single-Cell and Single-Nucleus Rna-Seq Experiments. Genome Research (2024)

John T. ChamberlinYounghee LeeGabor T. MarthAaron R. Quinlan

single-cell analysisgenomicsmolecular samplinggeneticssingle-nucleus rna-seq experimentsrna biologybioinformaticsgenome biology

Long-Read Single-Cell Rna Sequencing Enables the Study of Cancer Subclone-Specific Genotype and Phenotype in Chronic Lymphocytic Leukemia. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Gage S. BlackXiaomeng HuangYi QiaoPhilip MoosDeepa SampathDeborah M. StephensJennifer A. WoyachGabor T. Marth

cytogeneticscancer biologychronic lymphocytic leukemiabioinformaticsimmunologygenomicsgenome biologycancer researchcancer genomicsmolecular biologylong-read single-cell rnacancer subclone-specific genotypecancer geneticsrna biologyoncologygenetics

P207: Phenotype-Driven Algorithms for Enhanced Rare Disease Diagnostics. Genetics in Medicine Open (2024)

Isabelle CoopersteinAlistair WardGabor Marth

rare disease diagnosticsgenomicsphenotype-driven algorithmsmedical geneticsgenetics

Abstract 4295: Streamlining the Reconstruction of Subclonal Evolution in Dna Sequencing Data. Cancer Research (2023)

Gage BlackYi QiaoXiaomeng HuangGabor Marth

dna sequencing datadna sequencingoncologygenomicscancer researchmolecular biologysubclonal evolutioncancer genomicsbioinformaticscancer biology

O16: Phenotypic Patient Matching to Achieve Diagnoses in Rare Disease Cohorts*. Genetics in Medicine Open (2023)

Isabelle CoopersteinAlistair WardGabor Marth

rare disease cohortsdiagnosisgenomicsmedicinehuman geneticsmedical geneticsgenetics

P243: The Utah Neoseq Project: Developing and Implementing Genomic Sequencing in Acute Neonatal Care. Genetics in Medicine Open (2023)

Sabrina Malone-JenkinsBrian ShayotaChelsea SolorzanoRachel PalmquistSteven BoydenBarry MooreThomas NicholasRong MaoPinar Bayrak-ToydemirKatherine NobleAndrew FarrellEdgar HernandezShawn RynearsonCarson HoltAlistair WardNajla Al-SweelJian ZhaoMakenzie FulmerLucilla PizzoTing WenJohn O'SheaRobert LewisHayley ReynoldsEric FredricksonKelsey NicholsonDavid PattisonHunter BestLuca BrunelliMark YandellGabor MarthAaron QuinlanJohn CareyMartin Tristani-FirouziJoshua Bonkowsky

neonatologyutah neoseq projectgenome sequencinggenomicsacute neonatal caremedicinemedical geneticscritical caregeneticsgenomic sequencing

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Gabor Marth

Professor

University of Utah

Affiliations

Spencer Fox Eccles School of Medicine

Human Genetics

Gabor Marth is currently serving as a Human Genetics Professor at University of Utah.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Gabor Marth

University of Utah

Professor

You can click a keyword to filter the displayed items

Video Presentations

Notable Scholarly Works

Notable Federal Grants

Collaborators

A Bayesian Framework to Study Tumor Subclone–Specific Expression by Combining Bulk Dna and Single-Cell Rna Sequencing Data. Genome Research (2024)

Yi QiaoXiaomeng HuangPhilip J. MoosJonathan M. AhmannAnthony D. PomicterMichael W. DeiningerJohn C. ByrdJennifer A. WoyachDeborah M. StephensGabor T. Marth

Abstract 907: Screendl: A Transfer Learning Framework Integrating Tumor Omics and Functional Drug Screening for Personalized Clinical Drug Response Prediction. Cancer Research (2024)

Casey SedermanTonya Di SeraYi QiaoXiaomeng HuangBryan E. WelmAlana L. WelmGabor Marth

transfer learningtumor omicscancer researchpharmacologymedicinepersonalized medicinehealth sciencesoncologycancer biology

A Precision Oncology-Focused Deep Learning Framework for Personalized Selection of Cancer Therapy. bioRxiv (Cold Spring Harbor Laboratory) (2024)

precision medicineoncologytumor targetingdeep learningcancer therapysystems biologycancer genomicspersonalized medicinepersonalized selection

Clonal Dynamics of Aggressive Systemic Mastocytosis on Avapritinib Therapy. Blood Cancer Journal (2024)

Xiaomeng HuangAnthony D. PomicterJonathan AhmannYi QiaoOpal S. ChenTracy I. GeorgeNataly Cruz-RodriguezSameer Ahmad GuruGabor T. MarthMichael W. Deininger

avapritinib therapyaggressive systemic mastocytosisclonal dynamicshematology

Differences in Molecular Sampling and Data Processing Explain Variation Among Single-Cell and Single-Nucleus Rna-Seq Experiments. Genome Research (2024)

John T. ChamberlinYounghee LeeGabor T. MarthAaron R. Quinlan

single-cell analysisgenomicsmolecular samplinggeneticssingle-nucleus rna-seq experimentsrna biologybioinformaticsgenome biology

Long-Read Single-Cell Rna Sequencing Enables the Study of Cancer Subclone-Specific Genotype and Phenotype in Chronic Lymphocytic Leukemia. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Gage S. BlackXiaomeng HuangYi QiaoPhilip MoosDeepa SampathDeborah M. StephensJennifer A. WoyachGabor T. Marth

P207: Phenotype-Driven Algorithms for Enhanced Rare Disease Diagnostics. Genetics in Medicine Open (2024)

Isabelle CoopersteinAlistair WardGabor Marth

rare disease diagnosticsgenomicsphenotype-driven algorithmsmedical geneticsgenetics

Abstract 4295: Streamlining the Reconstruction of Subclonal Evolution in Dna Sequencing Data. Cancer Research (2023)

Gage BlackYi QiaoXiaomeng HuangGabor Marth

dna sequencing datadna sequencingoncologygenomicscancer researchmolecular biologysubclonal evolutioncancer genomicsbioinformaticscancer biology

O16: Phenotypic Patient Matching to Achieve Diagnoses in Rare Disease Cohorts*. Genetics in Medicine Open (2023)

Isabelle CoopersteinAlistair WardGabor Marth

rare disease cohortsdiagnosisgenomicsmedicinehuman geneticsmedical geneticsgenetics

P243: The Utah Neoseq Project: Developing and Implementing Genomic Sequencing in Acute Neonatal Care. Genetics in Medicine Open (2023)

neonatologyutah neoseq projectgenome sequencinggenomicsacute neonatal caremedicinemedical geneticscritical caregeneticsgenomic sequencing

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