Faculty

Institution

Unit

Venue

David Begun

Distinguished Professor

University of California, Davis

Affiliations

College of Biological Sciences

Evolution and Ecology

David Begun is currently serving as a College Of Biological Sciences Distinguished Professor at University of California, Davis.

Honors

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Experiences

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Education

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David Begun

University of California, Davis

Distinguished Professor

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genetics evolutionary biology population genetics genomics insect molecular biology evolutionary genetics molecular biology molecular evolution avian biology gene evolution genetic variation genome biology animal genetics drosophila melanogaster entomology gene expression molecular ecology insect science biological evolution molecular genetics population genomics drosophila simulans developmental biology heredity reproductive biology adaptation animal science phylogenetics evolutionary applications sexual selection dna polymorphism molecular population genetics forensic genetics plo biology protein evolution genetic diversity mammalian biology gametes speciation natural selection breeding behavior genome analysis molecular adaptation linkage disequilibrium gene function gene characterization gene recognition female reproductive system genomic analysis parallel evolution adaptive evolution reproductive science animal ecology systematics genetic predisposition recombination dynamic fertilisation reproduction response chromosome biology genetic mechanisms disease transmission cytogenetics developmental genetics protein genetics polymorphism (computer science) chromatin remodeling genome studies drosophila phylogeny dna polymorphism correlate recombination rates d. melanogaster whole-genome analysis genomic variation natural populations african diversity sub-saharan drosophila melanogaster ecology evolution population biology marine ecosystem-based management ecology conservation biology

Video Presentations

Notable Scholarly Works

Notable Federal Grants

Collaborators

De Novo Genes. Annual Review of Genetics (2024)

Li ZhaoNicolas SvetecDavid J. Begun

forensic geneticsgenetic analysispopulation geneticsgenomicsgenome biologymolecular geneticsfungal geneticsmolecular biologygene characterizationgene recognitionhuman geneticsgene expressionmedical geneticsevolutionary geneticsgenetics

Evolution and Genetics of Accessory Gland Transcriptome Divergence Between Drosophila Melanogaster and D. Simulans. Genetics (2024)

Alex C MajaneJulie M CridlandLogan K BlairDavid J Begun

genomicsgenome biologyevolutionary geneticsgenetic variationmolecular biologyevolutionary biologymolecular evolutiongene expressiontranscriptomegenetics

Quantifying Transcriptome Turnover on Phylogenies by Modeling Gene Expression as a Binary Trait. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Ammon ThompsonMichael R. MayBen HopkinsNerisa RiedlOlga BarminaBenjamin J. LiebeskindLi ZhaoDavid BegunArtyom Kopp

binary traittranscriptome turnoverphylogenomicsevolutionary biologygene expressiontranscriptome

Regional Specialization, Polyploidy, and Seminal Fluid Transcripts in the Drosophila Female Reproductive Tract. Proceedings of the National Academy of Sciences (2024)

Rachel C. ThayerElizabeth S. PolstonJixiang XuDavid J. Begun

seminal fluid transcriptsreproductive biologybiologyregional specializationfemale reproductive system

Evolution of Secondary Cell Number and Position in the Drosophila Accessory Gland. PLoS ONE (2023)

Yoko A TakashimaAlex C MajaneDavid J Begun

secondary cell numberinsect molecular biologyplo biologydevelopmental biologyavian biologydrosophila accessory glandmorphology (biology)evolutionary biologygenetics

Identifying Candidate De Novo Genes Expressed in the Somatic Female Reproductive Tract of Drosophila Melanogaster. G3 Genes Genomes Genetics (2023)

Kaelina D LombardoHayley K SheehyJulie M CridlandDavid J Begun

reproductive biologyinsect molecular biologyimmunologygenomicsgenome biologyinsect sciencemolecular geneticsmammalian biologymorphology (biology)molecular biologygene characterizationgene recognitiongene expressionentomologygenetics

Male-Derived Transcripts Isolated From the Mated Female Reproductive Tract in Drosophila Melanogaster. G3 Genes Genomes Genetics (2023)

Julie M CridlandDavid J Begun

reproductive biologyinsect molecular biologyanimal sciencegenome biologyavian biologybiologyanimal reproductionmolecular biologymale-derived transcriptsentomologyrna biologygenetics

New Insights Into the Dynamics of De Novo Gene Origin. bioRxiv (Cold Spring Harbor Laboratory) (2023)

Logan BlairJulie CridlandYige LuoDavid BegunArtyom Kopp

biological evolutiongenomicsgenome biologydevelopmental biologyevolutionary biologygene evolutionmolecular evolutiongenetics

Regional Specialization, Polyploidy, and Seminal Fluid Transcripts in the Drosophila Female Reproductive Tract. bioRxiv (Cold Spring Harbor Laboratory) (2023)

Rachel C. ThayerElizabeth S. PolstonJixiang XuDavid J. Begun

reproductive biologyinsect molecular biologyseminal fluid transcriptsdevelopmental biologyavian biologyevolutionary biologyentomologyregional specializationgenetics

Selection and Geography Shape Male Reproductive Tract Transcriptomes in Drosophila Melanogaster. Genetics (2023)

Julie M CridlandColin E ContinoDavid J Begun

animal scienceinsect molecular biologyanimal geneticsgenomicsgenome biologypopulation genomicsavian biologygeographycomparative genomicsevolutionary biologypopulation geneticstranscriptomegenetics

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David Begun

Distinguished Professor

University of California, Davis

Affiliations

College of Biological Sciences

Evolution and Ecology

David Begun is currently serving as a College Of Biological Sciences Distinguished Professor at University of California, Davis.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

David Begun

University of California, Davis

Distinguished Professor

You can click a keyword to filter the displayed items

Video Presentations

Notable Scholarly Works

Notable Federal Grants

Collaborators

De Novo Genes. Annual Review of Genetics (2024)

Li ZhaoNicolas SvetecDavid J. Begun

Evolution and Genetics of Accessory Gland Transcriptome Divergence Between Drosophila Melanogaster and D. Simulans. Genetics (2024)

Alex C MajaneJulie M CridlandLogan K BlairDavid J Begun

genomicsgenome biologyevolutionary geneticsgenetic variationmolecular biologyevolutionary biologymolecular evolutiongene expressiontranscriptomegenetics

Quantifying Transcriptome Turnover on Phylogenies by Modeling Gene Expression as a Binary Trait. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Ammon ThompsonMichael R. MayBen HopkinsNerisa RiedlOlga BarminaBenjamin J. LiebeskindLi ZhaoDavid BegunArtyom Kopp

binary traittranscriptome turnoverphylogenomicsevolutionary biologygene expressiontranscriptome

Regional Specialization, Polyploidy, and Seminal Fluid Transcripts in the Drosophila Female Reproductive Tract. Proceedings of the National Academy of Sciences (2024)

Rachel C. ThayerElizabeth S. PolstonJixiang XuDavid J. Begun

seminal fluid transcriptsreproductive biologybiologyregional specializationfemale reproductive system

Evolution of Secondary Cell Number and Position in the Drosophila Accessory Gland. PLoS ONE (2023)

Yoko A TakashimaAlex C MajaneDavid J Begun

secondary cell numberinsect molecular biologyplo biologydevelopmental biologyavian biologydrosophila accessory glandmorphology (biology)evolutionary biologygenetics

Identifying Candidate De Novo Genes Expressed in the Somatic Female Reproductive Tract of Drosophila Melanogaster. G3 Genes Genomes Genetics (2023)

Kaelina D LombardoHayley K SheehyJulie M CridlandDavid J Begun

Male-Derived Transcripts Isolated From the Mated Female Reproductive Tract in Drosophila Melanogaster. G3 Genes Genomes Genetics (2023)

Julie M CridlandDavid J Begun

reproductive biologyinsect molecular biologyanimal sciencegenome biologyavian biologybiologyanimal reproductionmolecular biologymale-derived transcriptsentomologyrna biologygenetics

New Insights Into the Dynamics of De Novo Gene Origin. bioRxiv (Cold Spring Harbor Laboratory) (2023)

Logan BlairJulie CridlandYige LuoDavid BegunArtyom Kopp

biological evolutiongenomicsgenome biologydevelopmental biologyevolutionary biologygene evolutionmolecular evolutiongenetics

Regional Specialization, Polyploidy, and Seminal Fluid Transcripts in the Drosophila Female Reproductive Tract. bioRxiv (Cold Spring Harbor Laboratory) (2023)

Rachel C. ThayerElizabeth S. PolstonJixiang XuDavid J. Begun

reproductive biologyinsect molecular biologyseminal fluid transcriptsdevelopmental biologyavian biologyevolutionary biologyentomologyregional specializationgenetics

Selection and Geography Shape Male Reproductive Tract Transcriptomes in Drosophila Melanogaster. Genetics (2023)

Julie M CridlandColin E ContinoDavid J Begun

animal scienceinsect molecular biologyanimal geneticsgenomicsgenome biologypopulation genomicsavian biologygeographycomparative genomicsevolutionary biologypopulation geneticstranscriptomegenetics

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10 / page

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Kirk Lohmueller

Institution

University of California, Los Angeles

evolutionary biology

small population size

H. Lisle Gibbs

Institution

Ohio State University

evolutionary biology

conservation genetics

John Kelly

Institution

University of Kansas

evolutionary biology

evolutionary theory

Charles H. Langley

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genetic variation

Michael Pfrender

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University of Notre Dame

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genomics

Mohamed A. F. Noor

Institution

Duke University

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evolutionary biology

Julian Catchen

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adaptation

biological invasion

Cheryl Hayashi

Institution

University of California, Riverside

spider

spider silks

Robert D. Reed

Institution

Cornell University

evolutionary theory

evolutionary biology

Michael Nachman

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evolutionary genetics

population genetics