Faculty

Institution

Unit

Venue

Awdhesh Dash Kalia

Professor

The University of Texas MD Anderson Cancer Center

Affiliations

Department Of Cancer Medicine

Division Of Diagnostic Imaging

School Of Public Health

School of Health Professions

The University of Texas MD Anderson Cancer Center

Awdhesh Dash Kalia is currently serving as a Cancer Medicine Professor at The University of Texas Md Anderson Cancer Center.

Honors

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Experiences

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Education

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Awdhesh Dash Kalia

The University of Texas MD Anderson Cancer Center

Professor

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microbiology clinical microbiology infectious diseases genetics molecular biology genomics microbial pathogenesis bacteria pathogenic bacteria applied microbiology pathogens infection control microbial genetics antimicrobial resistance microorganisms medical microbiology molecular microbiology bacteriology genome biology pathogen characterization molecular diagnostics environmental microbiology pathogen detection antibiotic resistance long-read sequencing veterinary medicine hospital infections nucleic acids evolutionary microbiology genome sequencing diagnostic microbiology high throughput sequencing helicobacter pylori plo biology microbial physiology antimicrobial resistance genes human macrophages whole-genome sequencing pseudomonas aeruginosa adaptation nature method liver physiology autophagy molecular gastroenterology neglected tropical diseases medical mycology molecular adaptation phage biology host-parasite relationships host genetics embryonic development phagocytes innate immune system protein evolution gene evolution evolutionary genetics protein genetics peptoids cellular senescence healthcare-associated infections hospital epidemiology typhoid fever temporal dynamics infectious respiratory disease functional adaptation ankyrin repeats functional diversity microbial proteins metronidazole resistance bacterial genomes mutation discovery legionella pneumophila f-box effector molecular mimicry intracellular proliferation protozoan hosts

Notable Scholarly Works

Notable Federal Grants

Collaborators

O14: Improving Detection of Variant Mecom Rearrangements Through Optical Genome Mapping and Repurposed Targeted Rna-Seq. Genetics in Medicine Open (2026)

genomicsgenome biologyoptical genome mappinggenome editingnext-generation sequencinggeneticsgenome analysisvariant mecom rearrangementsmolecular diagnosticsmolecular biologynucleic acids

73. Discovery and Validation of Genomic Alterations by Optical Genome Mapping and Nanopore Long-Read Sequencing. Cancer Genetics (2025)

genomicsgenome biologylong-read sequencingoptical genome mappingnext-generation sequencinghigh throughput sequencinggenomic alterationsgeneticsgenome sequencingdna sequencingmolecular biologybioinformaticsnucleic acids

Reproducibility and Accuracy of Bacterial Methylome Profiling Using Oxford Nanopore Technologies Nanopore Sequencing Platform. Microbial Genomics (2025)

oxford nanopore technologiesbiological engineeringhigh throughput sequencingmetagenomicsapplied microbiologyenvironmental microbiologyquantitative microbiologymicroorganismsbacteriabacterial methylomemicrobiologybioinformatics

Reproducibility and Accuracy of Nanopore-Based Methylome Profiling of Streptococcus Dysgalactiae Subspecies Equisimilis Strains From Cancer Patients. bioRxiv (Cold Spring Harbor Laboratory) (2025)

metagenomicsclinical microbiologyapplied microbiologymicrobial proteomicsmicroorganismsmicrobial cell factorymicrobial consortiumbiomolecular toolsmicrobial geneticsquantitative microbiologybacteriananopore-based methylome profilingmicrobial pathogenesisbiotechnology advancecancer patientsenvironmental microbiologymicrobial ecologybiomolecular engineeringbiofilmsmicrobiology

47. Genomic Characterization of the T-All Cell Line Ccrf-Cem Using Optical Genome Mapping and Nanopore Sequencing. Cancer Genetics (2024)

genomicsgenome biologylong-read sequencingoptical genome mappinggenomic characterizationgeneticsdna sequencingmolecular diagnosticsmolecular geneticsmolecular biology

Comprehensive Assessment of Initial Adaptation of Esbl Positive St131 Escherichia Coli to Carbapenem Exposure. bioRxiv (Cold Spring Harbor Laboratory) (2024)

antimicrobial agentsantimicrobial resistance genesinitial adaptationantimicrobial resistanceantibiotic resistancecomprehensive assessmentinfection controlclinical microbiologyapplied microbiologyenvironmental microbiologycarbapenem exposuredrug resistanceantibioticspathogenic bacteriaklebsiella pneumoniaeinfectious diseasesmicrobiology

Comprehensive Assessment of Initial Adaptation of Extended-Spectrum β-Lactamase–Positive St131 Escherichia Coli to Carbapenem Exposure. The Journal of Infectious Diseases (2024)

William C ShropshireXinhao SongJordan BremerSeokju SeoSusana RodriguezSelvalakshmi Selvaraj AnandAn Q DinhMicah M BhattiAnna KonovalovaCesar A AriasAwdhesh KaliaYousif ShamooSamuel A Shelburne

pathogensantimicrobial resistancemicrobial pathogenesisinfection controlepidemiologyclinical microbiologyantimicrobial susceptibilitydrug resistanceinfectious diseasesmicrobiologyclinical infectious disease

Identification of a Novel Cg307 Sub-Clade in Third-Generation-Cephalosporin-Resistant Klebsiella Pneumoniae Causing Invasive Infections in the USA. Microbial Genomics (2024)

Selvalakshmi Selvaraj AnandChin-Ting WuJordan BremerMicah BhattiTodd J. TreangenAwdhesh KaliaSamuel A. ShelburneWilliam C. Shropshire

pathogensgenomicspathogen transmissionantimicrobial resistanceantibiotic resistancedisease transmissioninvasive infectionsclinical microbiologypathogenic bacteriaglobal healthklebsiella pneumoniaebiological invasionsinfectious diseasesmicrobiology

Rapid Genomic Characterization of High-Risk, Antibiotic Resistant Pathogens Using Long-Read Sequencing to Identify Nosocomial. Antimicrobial Stewardship & Healthcare Epidemiology (2024)

Chin-Ting WuAmy SpalloneSherry CantuTodd TreangenWilliam ShropshireMicah BhattiIsrael GloverXiaojun LiuSamuel ShelburneAwdhesh Kalia

genomicslong-read sequencingantimicrobial resistanceantimicrobial stewardshipantibiotic resistanceantibiotic resistant pathogensepidemiologyclinical microbiologydiagnostic microbiologyrapid genomic characterizationpathogen detectioninfectious diseasesmicrobiology

Rapid Whole Genome Characterization of Antimicrobial-Resistant Pathogens Using Long-Read Sequencing to Identify Potential Healthcare Transmission. Infection Control and Hospital Epidemiology (2024)

Chin-Ting WuWilliam C. ShropshireMicah M BhattiSherry CantuIsrael K GloverSelvalakshmi Selvaraj AnandXiaojun LiuAwdhesh KaliaTodd J. TreangenRoy F ChemalyAmy SpalloneSamuel Shelburne

genomicslong-read sequencingantimicrobial resistanceinfection controlantimicrobial-resistant pathogensepidemiologyclinical microbiologyhealthcare-associated infectionspathogen detectionhospital epidemiologyinfectious diseasespathogen characterizationmicrobiologypotential healthcare transmission

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Awdhesh Dash Kalia

Professor

The University of Texas MD Anderson Cancer Center

Affiliations

Department Of Cancer Medicine

Division Of Diagnostic Imaging

School Of Public Health

School of Health Professions

The University of Texas MD Anderson Cancer Center

Awdhesh Dash Kalia is currently serving as a Cancer Medicine Professor at The University of Texas Md Anderson Cancer Center.

Honors

Create free account to unlock more features

Experiences

Create free account to unlock more features

Education

Create free account to unlock more features

Awdhesh Dash Kalia

The University of Texas MD Anderson Cancer Center

Professor

You can click a keyword to filter the displayed items

Notable Scholarly Works

Notable Federal Grants

Collaborators

O14: Improving Detection of Variant Mecom Rearrangements Through Optical Genome Mapping and Repurposed Targeted Rna-Seq. Genetics in Medicine Open (2026)

genomicsgenome biologyoptical genome mappinggenome editingnext-generation sequencinggeneticsgenome analysisvariant mecom rearrangementsmolecular diagnosticsmolecular biologynucleic acids

73. Discovery and Validation of Genomic Alterations by Optical Genome Mapping and Nanopore Long-Read Sequencing. Cancer Genetics (2025)

Reproducibility and Accuracy of Bacterial Methylome Profiling Using Oxford Nanopore Technologies Nanopore Sequencing Platform. Microbial Genomics (2025)

Reproducibility and Accuracy of Nanopore-Based Methylome Profiling of Streptococcus Dysgalactiae Subspecies Equisimilis Strains From Cancer Patients. bioRxiv (Cold Spring Harbor Laboratory) (2025)

47. Genomic Characterization of the T-All Cell Line Ccrf-Cem Using Optical Genome Mapping and Nanopore Sequencing. Cancer Genetics (2024)

genomicsgenome biologylong-read sequencingoptical genome mappinggenomic characterizationgeneticsdna sequencingmolecular diagnosticsmolecular geneticsmolecular biology

Comprehensive Assessment of Initial Adaptation of Esbl Positive St131 Escherichia Coli to Carbapenem Exposure. bioRxiv (Cold Spring Harbor Laboratory) (2024)

Comprehensive Assessment of Initial Adaptation of Extended-Spectrum β-Lactamase–Positive St131 Escherichia Coli to Carbapenem Exposure. The Journal of Infectious Diseases (2024)

William C ShropshireXinhao SongJordan BremerSeokju SeoSusana RodriguezSelvalakshmi Selvaraj AnandAn Q DinhMicah M BhattiAnna KonovalovaCesar A AriasAwdhesh KaliaYousif ShamooSamuel A Shelburne

Identification of a Novel Cg307 Sub-Clade in Third-Generation-Cephalosporin-Resistant Klebsiella Pneumoniae Causing Invasive Infections in the USA. Microbial Genomics (2024)

Selvalakshmi Selvaraj AnandChin-Ting WuJordan BremerMicah BhattiTodd J. TreangenAwdhesh KaliaSamuel A. ShelburneWilliam C. Shropshire

Rapid Genomic Characterization of High-Risk, Antibiotic Resistant Pathogens Using Long-Read Sequencing to Identify Nosocomial. Antimicrobial Stewardship & Healthcare Epidemiology (2024)

Chin-Ting WuAmy SpalloneSherry CantuTodd TreangenWilliam ShropshireMicah BhattiIsrael GloverXiaojun LiuSamuel ShelburneAwdhesh Kalia

Rapid Whole Genome Characterization of Antimicrobial-Resistant Pathogens Using Long-Read Sequencing to Identify Potential Healthcare Transmission. Infection Control and Hospital Epidemiology (2024)

Chin-Ting WuWilliam C. ShropshireMicah M BhattiSherry CantuIsrael K GloverSelvalakshmi Selvaraj AnandXiaojun LiuAwdhesh KaliaTodd J. TreangenRoy F ChemalyAmy SpalloneSamuel Shelburne

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10 / page